AdiantumRawSoilData <- read.table("AdiantumSoilData.csv", header=T, sep = ',', stringsAsFactors = F)
str(AdiantumRawSoilData)
## 'data.frame': 23 obs. of 26 variables:
## $ SampleName : chr "A 4.1" "A 4.2" "P 1.1 + 1.2" "P 1.3 + 1.4" ...
## $ Site : chr "West Farman Hill" "West Farman Hill" "Farrell Property" "Farrell Property" ...
## $ SpeciesID : chr "Aa" "Aa" "Ap" "Ap" ...
## $ pH : num 6.4 5.36 4.8 4.71 4.97 4.89 5.09 4.64 6.1 6.06 ...
## $ OM_Pct : num 28.9 53.29 3.96 4.6 5.6 ...
## $ Avail_P : num 4.7 12.85 2.4 3.25 1.9 ...
## $ K : int 86 125 36 75 58 60 66 64 34 34 ...
## $ Ca : int 394 836 154 296 486 406 789 165 2010 1525 ...
## $ Mg : int 1501 993 25 37 45 74 126 38 89 67 ...
## $ Zn : num 0.75 3.35 1.55 4.05 5.15 8.2 5.95 4.75 3.6 3 ...
## $ B : num 0.35 0.1 0.2 0.2 0.15 0.25 0.2 0.3 0.15 0.2 ...
## $ Mn : num 11.2 13.2 10.3 50.3 33.3 49.8 36.4 38.8 30 12.4 ...
## $ Cu : num 0.05 0.05 0.2 0.15 0.25 0.2 0.1 0.1 0.1 0.15 ...
## $ Fe : num 2.5 3.8 24.9 26.2 15.5 27.6 13.6 46.6 2.5 5.2 ...
## $ Al : int 2 5 343 150 143 125 51 242 25 79 ...
## $ Na : int 8 9 9 5 9 87 38 39 13 9 ...
## $ S : int 7 9 20 13 8 17 7 21 6 9 ...
## $ Exch_Acid : num 5.94 14.32 7.06 6.71 6.08 ...
## $ ECEC : num 14.7 12.78 1.07 1.98 2.95 ...
## $ CA_Base_Sat: num 9.54 15.43 9.47 17.04 26.91 ...
## $ MG_Base_Sat: num 60.6 30.54 2.56 3.55 4.15 ...
## $ K_Base_Sat : num 1.07 1.18 1.14 2.21 1.65 1.67 1.48 1.8 0.64 0.83 ...
## $ Pb : num 0.9 3.5 NA NA NA NA NA NA NA NA ...
## $ Ni : num 3 2.8 NA NA NA NA NA NA NA NA ...
## $ Cd : num 0.1 0.1 NA NA NA NA NA NA NA NA ...
## $ Cr : num 0.1 0.1 NA NA NA NA NA NA NA NA ...
table(AdiantumRawSoilData$pH)
##
## 4.64 4.71 4.8 4.89 4.97 5.09 5.26 5.27 5.36 5.47 5.49 5.6 5.82 5.85 5.94
## 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
## 6.06 6.1 6.14 6.29 6.31 6.4 6.63 7.04
## 1 1 1 1 1 1 1 1
summary(AdiantumRawSoilData$pH)
## Min. 1st Qu. Median Mean 3rd Qu. Max.
## 4.640 5.175 5.600 5.658 6.120 7.040
head(AdiantumRawSoilData)
## SampleName Site SpeciesID pH OM_Pct Avail_P K Ca Mg
## 1 A 4.1 West Farman Hill Aa 6.40 28.899 4.70 86 394 1501
## 2 A 4.2 West Farman Hill Aa 5.36 53.287 12.85 125 836 993
## 3 P 1.1 + 1.2 Farrell Property Ap 4.80 3.965 2.40 36 154 25
## 4 P 1.3 + 1.4 Farrell Property Ap 4.71 4.602 3.25 75 296 37
## 5 P 1.5 + 1.6 Farrell Property Ap 4.97 5.603 1.90 58 486 45
## 6 P 2.1 + 2.2 Farrell Property Ap 4.89 6.240 2.05 60 406 74
## Zn B Mn Cu Fe Al Na S Exch_Acid ECEC CA_Base_Sat
## 1 0.75 0.35 11.2 0.05 2.5 2 8 7 5.94 14.70 9.54
## 2 3.35 0.10 13.2 0.05 3.8 5 9 9 14.32 12.78 15.43
## 3 1.55 0.20 10.3 0.20 24.9 343 9 20 7.06 1.07 9.47
## 4 4.05 0.20 50.3 0.15 26.2 150 5 13 6.71 1.98 17.04
## 5 5.15 0.15 33.3 0.25 15.5 143 9 8 6.08 2.95 26.91
## 6 8.20 0.25 49.8 0.20 27.6 125 87 17 6.39 2.80 22.09
## MG_Base_Sat K_Base_Sat Pb Ni Cd Cr
## 1 60.60 1.07 0.9 3.0 0.1 0.1
## 2 30.54 1.18 3.5 2.8 0.1 0.1
## 3 2.56 1.14 NA NA NA NA
## 4 3.55 2.21 NA NA NA NA
## 5 4.15 1.65 NA NA NA NA
## 6 6.71 1.67 NA NA NA NA
tail(AdiantumRawSoilData)
## SampleName Site SpeciesID pH OM_Pct Avail_P K Ca Mg
## 18 V 3.2 Lowell Ledges Av 5.49 38.727 7.85 117 370 953
## 19 V 3.3 Lowell Ledges Av 6.14 6.968 1.50 34 217 1378
## 20 V 4.1 West Farman Hill Av 6.31 28.899 5.65 91 361 1868
## 21 V 4.2 West Farman Hill Av 5.94 14.157 2.15 33 247 1234
## 22 V 5.1 Belvidere Quarry Av 7.04 7.150 1.75 52 358 1213
## 23 V 5.2 Belvidere Quarry Av 6.63 19.799 3.40 53 661 1282
## Zn B Mn Cu Fe Al Na S Exch_Acid ECEC CA_Base_Sat MG_Base_Sat
## 18 2.60 0.10 18.4 0.10 4.2 2 16 8 10.85 10.09 8.84 37.93
## 19 2.45 0.15 16.1 0.05 4.4 6 8 4 2.16 12.66 7.32 77.50
## 20 3.05 0.25 21.0 0.05 2.3 4 12 9 6.23 17.61 7.57 65.31
## 21 1.80 0.10 8.8 0.05 2.8 7 8 5 4.30 11.60 7.77 64.66
## 22 0.95 0.25 7.6 0.55 2.2 31 8 4 0.00 12.03 14.88 84.01
## 23 0.75 0.30 7.6 0.10 3.2 4 11 7 3.32 14.12 18.95 61.24
## K_Base_Sat Pb Ni Cd Cr
## 18 1.43 1.45 4.05 0.10 0.05
## 19 0.59 0.35 9.60 0.10 0.10
## 20 0.98 0.50 10.50 0.15 0.10
## 21 0.53 0.75 6.85 0.10 0.05
## 22 1.11 0.05 0.95 0.05 0.05
## 23 0.78 0.30 3.00 0.05 0.10